Unit 3:  The Animals of Research

I       
Taxonomy

Panting dogStudy Guide

  1. What is "taxonomy"?

    Taxonomy is the science of classifying living things into groups based upon their similarities.  The goal of taxonomy is to create a common language so that we know what organism we are talking about. 

Starfish


Organisms are grouped in categories from general type (such as plant or animal) through smaller and more inclusive taxa (singular: taxon) that vary by fewer and fewer characteristics.  The taxa, from largest to smallest, are kingdom, phylum, class, order, family, genus and species. 

The naming system must conform to a rigid set of rules, reducing confusion that may arise from using local names and providing a uniform language to ensure accurate communication throughout the world.  The genus-species combination is called the scientific name or species of an organism.  These two names are either underlined or italicized. The generic (genus) name is always capitalized and the specific (species) name is always written in lower case.  The species name is never used alone:  it is meaningless without the genus.

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  1. Taxonomic Groups

    Kingdom:
    Many research organisms are animals--they come from the Kingdom Animalia.  Some researchers use living things from the other kingdoms, Plantae, Fungi, Monera and Protista.

    Phylum  (plural-  phyla):
    There are several phyla within each kingdom.  Organisms are broken into smaller, more recognizable groups based on their general body plan.  Most research animals belong to the phylum Chordata, animals that have a dorsal central nervous system, a notochord during embryonic development (a stiff cartilage structure under the dorsal surface of the body), and gills or lungs.  Most chordates have a spinal column (and are called vertebrates).  Mammals, birds, reptiles, amphibians, and fish belong to the phylum Chordata.  Other animal phyla include Arthropoda (insects and spiders), Mollusca (snails and clams), Annelida (earthworms), and Echinodermata (starfish and sea urchins).

    Class:
    The next level of taxonomy is the class.  Several classes are found in each phylum.  The classes of phylum Chordata are:

    • Mammalia  (mammals)
    • Aves  (birds)
    • Reptilia  (snakes, lizards and turtles)
    • Amphibia  (frogs and salamanders)
    • Osteichthyes  (bony fish, such as trout and goldfish)
    • Chrondrichthyes  (cartilaginous fish, such as sharks and rays)
    • Agnatha  (jawless fish, such as lampreys)

    Mammals are the most commonly used class of animals in research.  They are vertebrates that nourish their young with milk from the females' modified sweat (mammary) glands and have skin that is (more or less) covered  with hair.  

    Order:
    Several orders make up each class.  Some common orders of Mammalia used in research include:

    • Primates  (monkeys, apes and humans)
    • Lagomorpha  (rabbits and hares)
    • Rodentia  (mice, rats, hamsters and guinea pigs)
    • Carnivora  (dogs, cats and ferrets)

    Family:
    Several families make up each order.  Family names always end in -idae.  Families in the order Rodentia used for research include Muridae (rats and mice), Cricetidae (hamsters and gerbils), Cavidae (guinea pigs) and Chinchillidae (chinchillas).

    Genus  (plural-  genera):
    Each family contains from one to many genera.  Animals within the same genus are very closely related.  Genera within the family Muridae include Rattus  (the "Norway" rat) and Mus (the "house" mouse).

    Species:
    A species is a group of animals that is reproductively isolated from all other groups of animals;  one species can't, in other words, breed with another species.  This is not an absolute, however, because some similar species can interbreed  (the horse and donkey, for example, produce a mule when bred together).  The species name of the common laboratory rat is Rattus norvegicus  (it can also be written Rattus norvegicus).

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07/07/03